BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B11LP1|AL429348
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig273 1889 0.0
>3x_Contig273
Length = 1810
Score = 1889 bits (951), Expect = 0.0
Identities = 968/974 (99%), Gaps = 1/974 (0%)
Strand = Plus / Plus
Query: 1 atctctattttgtgaattgttttatttatttcatttcaatgacatcgcacttacaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atctctattttgtgaattgttttatttatttcatttcaatgacatcgcacttacaccaaa 272
Query: 61 atttacactttctctatactttatatatgaaaaaaaattgtcctttggttcttttgaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atttacactttctctatactttatatatgaaaaaaaattgtcctttggttcttttgaatc 332
Query: 121 gaactcaaagcttatttacctcttcatgwtgttcttccaatgttcttgtttttcatacct 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 333 gaactcaaagcttatttacctcttcatgttgttcttccaatgttcttgtttttcatacct 392
Query: 181 atcttatttcaacgataccgaatatatatgtcttccggaatatatactgtggtgtttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atcttatttcaacgataccgaatatatatgtcttccggaatatatactgtggtgtttgaa 452
Query: 241 gtaaatgacttggcagagtgagcgcagtctttgtgtgtgagcggatatattgaaagttta 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 453 gtaaatgacttggcagagtgagcgcagtctttgtgtgttagcggatatattgaaagttta 512
Query: 301 ttactctcatgcattggttactcatatataatgagattcaaaaatatgctgcttttatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttactctcatgcattggttactcatatataatgagattcaaaaatatgctgcttttatac 572
Query: 361 tctcatacttctcctcttgaagaaatcaaagactcttttggcagtgcttggttcacgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tctcatacttctcctcttgaagaaatcaaagactcttttggcagtgcttggttcacgttg 632
Query: 421 ttctttatgttctttacttgcggtaccatcagaactggttatatctttggcagaagaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ttctttatgttctttacttgcggtaccatcagaactggttatatctttggcagaagaaac 692
Query: 481 cattacagaagaacgattcatacgtttggcagatgcgtctataacttgagaactctttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cattacagaagaacgattcatacgtttggcagatgcgtctataacttgagaactctttgg 752
Query: 541 aggtaacatcgaatgtctgtvatttgttctgtttgatggattcgatgatactctcggttt 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aggtaacatcgaatgtctgtaatttgttctgtttgatggattcgatgatactctcggttt 812
Query: 601 tgatgtttcgaattgatttatcgaccccgatacgtttctagacggtataccattcgattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tgatgtttcgaattgatttatcgaccccgatacgtttctagacggtataccattcgattt 872
Query: 661 aacagaagaaattctttcatttgttttctgtgaatttgcagatactcttcttccgccaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aacagaagaaattctttcatttgttttctgtgaatttgcagatactcttcttccgccaga 932
Query: 721 agagtcggagctgacactcgtctttgaattattatagtatgagtaaaaggatagtaaact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 agagtcggagctgacactcgtctttgaattattatagtatgagtaaaaggatagtaaact 992
Query: 781 gaaccttttctctttcttggaatgtgagtntgctcttgctatcgaggcttgtgattgatg 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 993 gaaccttttctctttcttggaatgtgagtctgctcttgctatcgaggcttgtgattgatg 1052
Query: 841 ttgttgtgggggtttctgtaggtgttcgctctccggtttgctgataggaatgtgagcatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ttgttgtgggggtttctgtaggtgttcgctctccggtttgctgataggaatgtgagcatc 1112
Query: 901 ttcctttcgaggttcattaataacaatctttccgaattccttggtcsagttattggaa-t 959
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1113 ttcctttcgaggttcattaataacaatctttccgaattccttggtcaagttattggaatt 1172
Query: 960 ttcaacgggttttt 973
||||||||||||||
Sbjct: 1173 ttcaacgggttttt 1186
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9235
Number of Sequences: 1807
Number of extensions: 9235
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)